by Alejandro Ochoa García


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About me

My Research Summary
My Research Summary, in statistical and computational biology
I've studied evolution in DNA and proteins, and malaria.
Short bio
CVRRICVLVM VITAE, my course of life
Yes, I've been a nerd since I was little.
E-mail Me
E-mail Me
Short messages only please.

Computational biology

DomStratStats, stratified statistics for protein domains
Compute domain q-values and local FDRs, and tiered q-values (combining HMMER3 domain and sequence data).
dPUC 2
dPUC 2, Domain Prediction Using Context
Extend your Pfam predictions without loss of precision using domain context!
RandProt, generate high-order Markov random protein sequences
Fast implementation that captures subtleties of protein sequences
My public code
My public code, description of my original Perl packages
The union of code across the latest DomStratStats, dPUC, and RandProt distributions.
Domain predictions for the Apicomplexa
dPUC, Domain Prediction Using Context
Extend your Pfam predictions without loss of precision using domain context!


Prison for Kids
Prison for Kids, my fan page for my brother's band
A wikipedia-style article of this amazing new band
Prison for Kids Lyrics
Prison for Kids Lyrics, and liner notes
Covers every release (albums, EPs, singles)
6 items
César's original soundtracks
César's original soundtracks, from his short films
Excellent music back when he was only an amateur in college
29 items
Rock Concerts
Rock Concerts, In My Experience
A list of concerts that I've been to with a lot of information about them, including links to pictures.
32 items

Video and photography

MolBio Holiday Party Skits
MolBio Holiday Party Skits, at Princeton
The department has a holiday party with skits made by graduate students.
41 items
Cesar's short films
Cesar's short films, Inspired and filmed in Juarez
Directed and have music by César
21 items
Garcia, the family of my mother
It focuses mainly on my grandfather Baronio Garcia Montalvo, and in my childhood with the family.
15 items

82 items

4 items
Panoramic Pictures
Panoramic Pictures
Interesting panoramic pictures.
MIT class of 2006
MIT class of 2006
See a pirate copy of my class picture in the Massachusetts Institute of Technology.
1 items


Ochoa, the Family Name
A brief history of my paternal family name.
A collection of quotes that I like a lot.
28 items


FDR and q-values
FDR and q-values, illustrating John Storey's method
Computing the false discovery rate is easier than you imagine!
Information theory
Information theory, with intuitive examples on personal data
Names, birthdates, addresses, and other data.

Programming and computers

My website
My website, a brief history
Knowing how to program, and wanting to post lots of pictures, have been the main driving forces behind my website.
nVIDIA Drivers
nVIDIA Drivers, STOP Errors in Windows XP
An e-mail that I sent to Gateway/nVIDIA so that they could fix my problems.
nVIDIA Drivers Follow-up
CGI Environment Variables
CGI Environment Variables
See the information that the internet spreads about you and me.