VIIIA

Short bio, My career, interests, hobbies, life
I'm a well-rounded nerd

Ochoa Lab, at Duke University
Research in statistical genetics and computational biology
ochoalab.github.io

My Research Summary, in statistical and computational biology
I've studied evolution in DNA and proteins, and malaria.

CVRRICVLVM VITAE, my course of life
Yes, I've been a nerd since I was little.

simfam, simulate and model family pedigrees with structured founders
Simulate random pedigrees, calculate kinship and admixture matrices, draw genotypes
github.com

simtrait, simulate complex traits from genotypes
Sets heritability accurately
github.com

genio, genetics input/output R functions
Handles plink and other formats
github.com

popkin, estimate population kinship and the generalized FST
Based on a model of arbitrary population structure
github.com

BNPSD, simulate genotypes from the BN-PSD admixture model
Based on the Balding-Nichols, Pritchard-Stephens-Donnelly, and generalized FST models
github.com

DomStratStats, stratified statistics for protein domains
Compute domain q-values and local FDRs, and tiered q-values
github.com

dPUC 2, Domain Prediction Using Context
Extend your Pfam predictions without loss of precision using domain context!
github.com

RandProt, generate high-order Markov random protein sequences
Fast implementation that captures subtleties of protein sequences
github.com

dPUC, Domain Prediction Using Context
Extend your Pfam predictions without loss of precision using domain context!

Prison for Kids, my fan page
A wikipedia-style article of this amazing band

Prison for Kids Lyrics, and liner notes
Covers every release (albums, EPs, singles)
7 items

César's original soundtracks, from his short films
Excellent music back when he was only an amateur in college
29 items

Rock Concerts, In My Experience
A list of concerts that I've been to with a lot of information about them, including links to pictures.
32 items

MolBio Holiday Party Skits, at Princeton
The department has a holiday party with skits made by graduate students.
41 items

Cesar's short films, Inspired and filmed in Juarez
Directed and have music by César
21 items

Garcia, the family of my mother
It focuses mainly on my grandfather Baronio Garcia Montalvo, and in my childhood with the family.
18 items

ochoa

88 items

Sketches
4 items

Ochoa, the Family Name
A brief history of my paternal family name.

Quotes
A collection of quotes that I like a lot.
28 items

FDR and q-values, illustrating John Storey's method
Computing the false discovery rate is easier than you imagine!

Information theory, with intuitive examples on personal data
Names, birthdates, addresses, and other data.

My website, a brief history
Knowing how to program, and wanting to post lots of pictures, have been the main driving forces behind my website.

About me